Category Archives: HowTo

cloning trick: ligation of multiple inserts

I’ve spent the last couple months building a plasmid library, and in the process I thought of a trick. Ligations, perhaps the worst part of cloning, are notoriously finicky reactions. The goal is to take several pieces of linear DNA, … Continue reading

Leave a Comment

Filed under HowTo, science

Mindforge Tutorial: Cleartype Tuner

As part of the continuing closet-cleaning series: WindowsXP text is ugly and induces eye-pain and headaches. Here’s what you can do about it:

Leave a Comment

Filed under computers/software, HowTo

Mindforge Tutorial: Try out Linux using Wubi

Still cleaning out the closet… I made this video tutorial a couple years ago for my brother‘s and my short-lived computer company. It’s a little outdated, but (probably) still accurate.

Leave a Comment

Filed under computers/software, HowTo

Mindforge Tutorial: Disk Images

If your first thought, when reading the title of this post, was “What in the hell is a disk image?”, you probably aren’t alone. But before you decide that you don’t care enough to read on, let me quickly tell … Continue reading

Leave a Comment

Filed under computers/software, HowTo

useful bioinformatics resources

I’ll try to keep this page updated with the kinds of things that I’m familiar with and find the most useful. The resources in this list will be used extensively in tutorials on this site. General Genes:       … Continue reading

Leave a Comment

Filed under computers/software, HowTo, science

Get Notepad++ NOW

What follows is from an old post I wrote on replacing Windows Notepad with Notepad++, but is just the part where I ramble about how amazing it is and why you should use it. To get to the post on … Continue reading

1 Comment

Filed under computers/software, HowTo

Notepad++ and Regular Expressions

A few years ago I wrote a post on making Notepad++ your default text editor, wherein I expressed my extreme love for this little piece of open source software. To date, I use it for just about everything and, after … Continue reading

1 Comment

Filed under computers/software, HowTo, science

Connecting Python to the Web at UT Southwestern

While working on a little Python script to do  some datamining for lab, I stumbled upon a serious problem: When connecting to the Internet via the school’s network, whether hard-wired, wifi, or through VPN, I could not get Python to … Continue reading

Leave a Comment

Filed under computers/software, HowTo

Python: ad infinitum

In Seth’s post on dice rolling, he briefly mentioned something called a “while loop”. It has the basic structure while (this is true): (do this) Note: Courier font or italics show code. WordPress is douchey about font-changing, so it’s easier … Continue reading

2 Comments

Filed under computers/software, HowTo

Inkscape: Digitally sign a PDF

Printers are dumb and waste paper. There is little that I hate more (aside from Apple) than having to print a document, sign it, and then scan, fax, or mail the stupid hardcopy. So, I decided to try to cheat … Continue reading

Leave a Comment

Filed under computers/software, HowTo